Publications of Jakub Otwinowski

Journal Article (5)

1.
Journal Article
Pun, M. N.; Ivanov, A.; Bellamy, Q.; Montague, Z.; LaMont, C. H.; Bradley, P.; Otwinowski, J.; Nourmohammad, A.: Learning the shape of protein microenvironments with a holographic convolutional neural network. Proceedings of the National Academy of Sciences of the United States of America 121 (6), e2300838121 (2024)
2.
Journal Article
LaMont, C. H.; Otwinowski, J.; Vanshylla, K.; Gruell, H.; Klein, F.; Nourmohammad, A.: Design of an optimal combination therapy with broadly neutralizing antibodies to suppress HIV-1. eLife 11, e76004 (2022)
3.
Journal Article
Montague, Z.; Lv, H.; Otwinowski, J.; DeWitt, W. S.; Isacchini, G.; Yip, G. K.; Ng, W. W.; Tsang, O. T.-Y.; Yuan, M.; Liu, H. et al.; Wilson, I. A.; Peiris, J.S. M.; Wu, N. C.; Nourmohammad, A.; Mok, C. K. P.: Dynamics of B cell repertoires and emergence of cross-reactive responses in patients with different severities of COVID-19. Cell Reports 35, 109173 (2021)
4.
Journal Article
Otwinowski, J.; LaMont, C. H.; Nourmohammad, A.: Information-Geometric Optimization with Natural Selection. Entropy 22, 967 (2020)
5.
Journal Article
Wu, N. C.; Otwinowski, J.; Thompson, A. J.; Nycholat, C. M.; Nourmohammad, A.; Wilson, I. A.: Major antigenic site B of human influenza H3N2 viruses has an evolving local fitness landscape. Nature Communications 11 (1), 1233 (2020)
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